ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3wz4B1 - ECOD Domain | ECOD

ECOD/Domains/e3wz4B1

e3wz4B1

UID: 001567414

PDB

Range: B:71-207
PDB: 3WZ4 chain B(all domains)
UniProt: O54626 (all domains)
Gene: dotI

Molecule: DotI

3D Structure

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Related Domains

Browse other domains in T4BSS_DotI_IcmL →

Classification

AArchitecturea+b two layers(a.11)

XX-groupCystatin-like(243)

HH-groupNTF2-like(243.1)

TT-groupNTF2-like(243.1.1)

FFamilyT4BSS_DotI_IcmL(243.1.1.15)

Ligands

in contact, ≤ 4 Å

(4R)-2-METHYLPENTANE-2,4-DIOLMRD

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF11393T4BSS_DotI_IcmL

Type-IV b secretion system, inner-membrane complex component

ClanCL0051NTF2

External Links

ECOD PDB View: 3WZ4 RCSB PDB: 3WZ4 PDBe: 3WZ4 UniProt: O54626

Downloads

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