ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4rkxA1 - ECOD Domain | ECOD

ECOD/Domains/e4rkxA1

e4rkxA1

UID: 001567559

PDB

Range: A:146-398
PDB: 4RKX chain A(all domains)
UniProt: A0A0M3KKW7 (all domains)
Gene: speB

Molecule: Streptopain

3D Structure

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Related Domains

Browse other domains in Peptidase_C10 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyPeptidase_C10(219.1.1.10)

Ligands

in contact, ≤ 4 Å

benzyl (cyanomethyl)carbamate3S9

+ 1 additive (Nitrate)

NitrateNO3
DrugBank DB14049

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01640Peptidase_C10

Peptidase C10 family

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 4RKX RCSB PDB: 4RKX PDBe: 4RKX UniProt: A0A0M3KKW7

Downloads

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