ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4s2mC2 - ECOD Domain | ECOD

ECOD/Domains/e4s2mC2

e4s2mC2

UID: 001567581

PDB

Range: C:25-64,C:162-265
PDB: 4S2M chain C(all domains)
UniProt: F6KZJ2 (all domains)
Gene: blaOXA-163

Molecule: Beta-lactamase

3D Structure

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Related Domains

Browse other domains in Transpeptidase →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3)

TT-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3.1)

FFamilyTranspeptidase(223.3.1.3)

Ligands

in contact, ≤ 4 Å

Iodide ionIOD

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00905Transpeptidase

Penicillin binding protein transpeptidase domain

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 4S2M RCSB PDB: 4S2M PDBe: 4S2M UniProt: F6KZJ2

Downloads

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