ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4qi1C1 - ECOD Domain | ECOD

ECOD/Domains/e4qi1C1

e4qi1C1

UID: 001568705

PDB

Range: C:11-238
PDB: 4QI1 chain C(all domains)
UniProt: Q18DH8 (all domains)
Gene: bop1

Molecule: Bacteriorhodopsin-I

3D Structure

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Related Domains

Browse other domains in Bac_rhodopsin →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFamily A G protein-coupled receptor-like(5001)

HH-groupFamily A G protein-coupled receptor-like(5001.1)

TT-groupFamily A G protein-coupled receptor-like(5001.1.1)

FFamilyBac_rhodopsin(5001.1.1.6)

Ligands

in contact, ≤ 4 Å

[(Z)-octadec-9-enyl] (2R)-2,3-bis(oxidanyl)propanoateMPG
drugDrugBank DB03831
RetinalRET

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01036Bac_rhodopsin

Bacteriorhodopsin-like protein

ClanCL0192GPCR_A

External Links

ECOD PDB View: 4QI1 RCSB PDB: 4QI1 PDBe: 4QI1 UniProt: Q18DH8

Downloads

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