ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4dyoA2 - ECOD Domain | ECOD

ECOD/Domains/e4dyoA2

e4dyoA2

UID: 001571781

PDB

Range: A:7-99,A:243-468
PDB: 4DYO chain A(all domains)
UniProt: Q9ULA0 (all domains)
Gene: DNPEP

Molecule: Aspartyl aminopeptidase

3D Structure

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Related Domains

Browse other domains in Peptidase_M18 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPhosphorylase/hydrolase-like(2011)

HH-groupZn-dependent exopeptidases(2011.1)

TT-groupZn-dependent exopeptidases(2011.1.1)

FFamilyPeptidase_M18(2011.1.1.7)

Ligands

in contact, ≤ 4 Å

N-hydroxy-L-asparagineSD4
Zinc ionZN
metal
Magnesium ionMG

Pfam Families

PF02127Peptidase_M18

Aminopeptidase I zinc metalloprotease (M18)

ClanCL0865ZnExoPePases

External Links

ECOD PDB View: 4DYO RCSB PDB: 4DYO PDBe: 4DYO UniProt: Q9ULA0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metalwithin 5 Å only

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.