ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3purA2 - ECOD Domain | ECOD

ECOD/Domains/e3purA2

e3purA2

UID: 001571820

PDB

Range: A:192-205,A:225-287
PDB: 3PUR chain A(all domains)
UniProt: Q9GYI0 (all domains)
Gene: jmjd-1.2

Molecule: Lysine-specific demethylase 7 homolog

3D Structure

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Related Domains

Browse other domains in PHD →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupFYVE/PHD zinc finger(376.1.3)

FFamilyPHD(376.1.3.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal
(2R)-2-hydroxypentanedioic acid2HG
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PHD-finger

ClanCL0229RING

External Links

ECOD PDB View: 3PUR RCSB PDB: 3PUR PDBe: 3PUR UniProt: Q9GYI0

Downloads

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