ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1y7911 - ECOD Domain | ECOD

ECOD/Domains/e1y7911

e1y7911

UID: 000157490

PDB

Range: 1:1-680
PDB: 1Y79 chain 1(all domains)
UniProt: P24171 (all domains)
Gene: dcp

Molecule: Peptidyl-Dipeptidase Dcp

3D Structure

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Related Domains

Browse other domains in Peptidase_M3 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M3(2498.1.1.6)

Ligands

in contact, ≤ 4 Å

GlycineGLY
drugDrugBank DB00145
LysineLYS
drugDrugBank DB00123
Aspartic acid

Pfam Families

PF01432Peptidase_M3

Peptidase family M3

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 1Y79 RCSB PDB: 1Y79 PDBe: 1Y79 UniProt: P24171

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

drugDrugBank DB00128within 5 Å only

TryptophanTRP

drugDrugBank DB00150within 5 Å only

Zinc ionZN

metal

Shown in the structure viewer. Drug annotations from DrugDomain.