ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3q9tC1 - ECOD Domain | ECOD

ECOD/Domains/e3q9tC1

e3q9tC1

UID: 001576293

PDB

Range: C:2-303,C:518-580
PDB: 3Q9T chain C(all domains)
UniProt: Q2UD26 (all domains)
Gene: AO090012000349

Molecule: Choline dehydrogenase and related flavoproteins

3D Structure

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Related Domains

Browse other domains in GMC_oxred_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyGMC_oxred_N(2003.1.2.2)

Ligands

in contact, ≤ 4 Å

[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl(2R,3S,4S)-5-(8-formyl-7-methyl-2,4-dioxo-3,4-dihydrobenzo[g]pteridin-10(2H)-yl)-2,3,4-trihydroxypentyl dihydrogendiphosphateFAY

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00732GMC_oxred_N

GMC oxidoreductase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3Q9T RCSB PDB: 3Q9T PDBe: 3Q9T UniProt: Q2UD26

Downloads

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