ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1yggA1 - ECOD Domain | ECOD

ECOD/Domains/e1yggA1

e1yggA1

UID: 000157643

PDB

Range: A:228-539
PDB: 1YGG chain A(all domains)
UniProt: A6VKV4 (all domains)
Gene: pckA

Molecule: phosphoenolpyruvate carboxykinase

3D Structure

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Related Domains

Browse other domains in PEPCK_ATP →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupPEP carboxykinase catalytic C-terminal domain(2004.1.2)

FFamilyPEPCK_ATP(2004.1.2.2)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01293PEPCK_ATP

Phosphoenolpyruvate carboxykinase

ClanCL0374PEP-carboxyk

External Links

ECOD PDB View: 1YGG RCSB PDB: 1YGG PDBe: 1YGG UniProt: A6VKV4

Downloads

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