ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2agcA1 - ECOD Domain | ECOD

ECOD/Domains/e2agcA1

e2agcA1

UID: 000158541

PDB

Range: A:1-162
PDB: 2AGC chain A(all domains)
UniProt: Q60648 (all domains)
Gene: Gm2a

Molecule: Ganglioside GM2 activator

3D Structure

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Related Domains

Browse other domains in E1_DerP2_DerF2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyE1_DerP2_DerF2(11.1.1.37)

Ligands

in contact, ≤ 4 Å

Lauric acidDAO
drugDrugBank DB03017
Myristic acidMYR
drugDrugBank DB08231

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02221E1_DerP2_DerF2

ML domain

ClanCL0532LIG

External Links

ECOD PDB View: 2AGC RCSB PDB: 2AGC PDBe: 2AGC UniProt: Q60648

Downloads

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