ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3si8A4 - ECOD Domain | ECOD

ECOD/Domains/e3si8A4

e3si8A4

UID: 001585731

PDB

Range: A:243-312
PDB: 3SI8 chain A(all domains)
UniProt: Q9Y253 (all domains)
Gene: POLH

Molecule: DNA polymerase eta

3D Structure

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Related Domains

Browse other domains in POLH-Rev1_HhH →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupSAM domain-like(102.1.1)

FFamilyPOLH-Rev1_HhH(102.1.1.47)

Ligands

in contact, ≤ 4 Å

1,4-DithiothreitolDTT
drugDrugBank DB04447
(2R,3S,5R)-5-(6-amino-9H-purin-9-yl)-tetrahydro-2-(hydroxymethyl)furan-3-ol3D1

+ 2 additives (Glycerin, 1,2-ETHANEDIOL)

Pfam Families

PF21704POLH-Rev1_HhH

DNApol eta/Rev1, HhH motif

ClanCL0198HHH

External Links

ECOD PDB View: 3SI8 RCSB PDB: 3SI8 PDBe: 3SI8 UniProt: Q9Y253

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Glycerin

DrugBank DB09462

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.