ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2cqfA1 - ECOD Domain | ECOD

ECOD/Domains/e2cqfA1

e2cqfA1

UID: 001593863

PDB

Range: A:158-192
PDB: 2CQF chain A(all domains)
UniProt: Q9H9Z2 (all domains)
Gene: LIN28A

Molecule: RNA-binding protein LIN-28

3D Structure

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Related Domains

Browse other domains in Lin-28A-like_zf-CCHC_2 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupCCHC-type 1 zinc finger(396)

HH-groupCCHC-type 1 zinc finger(396.3)

TT-groupCCHC-type 1 zinc finger(396.3.1)

FFamilyLin-28A-like_zf-CCHC_2(396.3.1.4)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF21890Lin-28A-like_zf-CCHC_2

Lin-28A-like, second zinc knuckle

ClanCL0511Retroviral_zf

External Links

ECOD PDB View: 2CQF RCSB PDB: 2CQF PDBe: 2CQF UniProt: Q9H9Z2

Downloads

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