ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3kv6D1 - ECOD Domain | ECOD

ECOD/Domains/e3kv6D1

e3kv6D1

UID: 001597161

PDB

Range: D:32-98
PDB: 3KV6 chain D(all domains)
UniProt: Q6ZMT4 (all domains)
Gene: KDM7A

Molecule: JmjC domain-containing histone demethylation protein 1D

3D Structure

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Related Domains

Browse other domains in PHD_UBR7-like →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupFYVE/PHD zinc finger(376.1.3)

FFamilyPHD_UBR7-like(376.1.3.56)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF30811PHD_UBR7-like

UBR7-like PHD finger

ClanCL0229RING

External Links

ECOD PDB View: 3KV6 RCSB PDB: 3KV6 PDBe: 3KV6 UniProt: Q6ZMT4

Downloads

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