ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3c6qC2 - ECOD Domain | ECOD

ECOD/Domains/e3c6qC2

e3c6qC2

UID: 001606060

PDB

Range: C:1-103,C:237-269
PDB: 3C6Q chain C(all domains)
UniProt: Q9WXW9 (all domains)
Gene: TM_0114

Molecule: Sugar ABC transporter, periplasmic sugar-binding protein

3D Structure

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Related Domains

Browse other domains in Peripla_BP_4 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupPeriplasmic binding protein-like I(2007.1.2)

FFamilyPeripla_BP_4(2007.1.2.11)

Ligands

in contact, ≤ 4 Å

beta-D-xylopyranoseXYP

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13407Peripla_BP_4

Periplasmic binding protein domain

ClanCL0144Periplas_BP

External Links

ECOD PDB View: 3C6Q RCSB PDB: 3C6Q PDBe: 3C6Q UniProt: Q9WXW9

Downloads

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