ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2gptA1 - ECOD Domain | ECOD

ECOD/Domains/e2gptA1

e2gptA1

UID: 000160711

PDB

Range: A:322-422
PDB: 2GPT chain A(all domains)
UniProt: Q9SQT8 (all domains)
Gene: EMB3004

Molecule: 3-dehydroquinate dehydratase/ shikimate 5-dehydrogenase

3D Structure

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Related Domains

Browse other domains in Shikimate_dh_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupAminoacid dehydrogenase-like, N-terminal domain(2007.1.6)

FFamilyShikimate_dh_N(2007.1.6.4)

Ligands

in contact, ≤ 4 Å

(3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLIC ACIDSKM

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08501Shikimate_dh_N

Shikimate dehydrogenase substrate binding domain

ClanCL0603AA_dh_N

External Links

ECOD PDB View: 2GPT RCSB PDB: 2GPT PDBe: 2GPT UniProt: Q9SQT8

Downloads

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