ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2gptA2 - ECOD Domain | ECOD

ECOD/Domains/e2gptA2

e2gptA2

UID: 000160712

PDB

Range: A:423-612
PDB: 2GPT chain A(all domains)
UniProt: Q9SQT8 (all domains)
Gene: EMB3004

Molecule: 3-dehydroquinate dehydratase/ shikimate 5-dehydrogenase

3D Structure

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Related Domains

Browse other domains in Shikimate_DH,SDH_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyShikimate_DH,SDH_C(2003.1.1.25)

Ligands

in contact, ≤ 4 Å

(3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLIC ACIDSKM

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01488Shikimate_DH

Shikimate / quinate 5-dehydrogenase

ClanCL0063NADP_Rossmann

Shikimate 5'-dehydrogenase C-terminal domain

External Links

ECOD PDB View: 2GPT RCSB PDB: 2GPT PDBe: 2GPT UniProt: Q9SQT8

Downloads

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