ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4dx5A8 - ECOD Domain | ECOD

ECOD/Domains/e4dx5A8

e4dx5A8

UID: 001608029

PDB

Range: A:567-673
PDB: 4DX5 chain A(all domains)
UniProt: P31224 (all domains)
Gene: acrB

Molecule: Acriflavine resistance protein B

3D Structure

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Related Domains

Browse other domains in ACR_tran →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFerredoxin domains in multidrug efflux transporter(304.28)

TT-groupMultidrug efflux transporter AcrB pore domain(304.28.1)

FFamilyACR_tran(304.28.1.1)

Ligands

in contact, ≤ 4 Å

HexaneHEX

+ 2 additives (Glycerin, Dodecyl-beta-d-maltoside)

GlycerinGOL
DrugBank DB09462
Dodecyl-beta-d-maltosideLMT

Pfam Families

PF00873ACR_tran

AcrB/AcrD/AcrF family

ClanCL0322RND_permease

External Links

ECOD PDB View: 4DX5 RCSB PDB: 4DX5 PDBe: 4DX5 UniProt: P31224

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.