ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2d9nA2 - ECOD Domain | ECOD

ECOD/Domains/e2d9nA2

e2d9nA2

UID: 000160871

PDB

Range: A:90-132
PDB: 2D9N chain A(all domains)
UniProt: O95639 (all domains)
Gene: CPSF4

Molecule: Cleavage and polyadenylation specificity factor, 30 kDa subunit

3D Structure

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Related Domains

Browse other domains in zf-CCCH →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupCCCH zinc finger(906)

HH-groupCCCH zinc finger(906.1)

TT-groupCCCH zinc finger(906.1.1)

FFamilyzf-CCCH(906.1.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00642zf-CCCH

Zinc finger C-x8-C-x5-C-x3-H type (and similar)

ClanCL0537CCCH_zf

External Links

ECOD PDB View: 2D9N RCSB PDB: 2D9N PDBe: 2D9N UniProt: O95639

Downloads

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