ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2cimA2 - ECOD Domain | ECOD

ECOD/Domains/e2cimA2

e2cimA2

UID: 000160969

PDB

Range: A:1-160
PDB: 2CIM chain A(all domains)
UniProt: Q46AN5 (all domains)
Gene: serS2

Molecule: SERYL-TRNA SYNTHETASE

3D Structure

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Related Domains

Browse other domains in tRNA_bind_4 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupLuxS, MPP, ThrRS/AlaRS common domain(309)

HH-groupLuxS, MPP, ThrRS/AlaRS common domain(309.1)

TT-groupThrRS/AlaRS editing domain(309.1.2)

FFamilytRNA_bind_4(309.1.2.2)

Ligands

in contact, ≤ 4 Å

PLATINUM (II) IONPT
metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF18490tRNA_bind_4

tRNA-binding domain

ClanCL0094Peptidase_ME

External Links

ECOD PDB View: 2CIM RCSB PDB: 2CIM PDBe: 2CIM UniProt: Q46AN5

Downloads

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