ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3go5A1 - ECOD Domain | ECOD

ECOD/Domains/e3go5A1

e3go5A1

UID: 001613752

RepresentativePDB

Range: A:135-220
PDB: 3GO5 chain A(all domains)
UniProt: Q97R81 (all domains)

Molecule: Multidomain protein with S1 RNA-binding domains

3D Structure

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Related Domains

Browse other domains in CvfB_2nd →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyCvfB_2nd(2.1.1.113)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF21543CvfB_2nd

Virulence regulatory factor CvfB, second domain

ClanCL0021OB

External Links

ECOD PDB View: 3GO5 RCSB PDB: 3GO5 PDBe: 3GO5 UniProt: Q97R81

Downloads

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