ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4mfdA3 - ECOD Domain | ECOD

ECOD/Domains/e4mfdA3

e4mfdA3

UID: 001616908

PDB

Range: A:493-837
PDB: 4MFD chain A(all domains)
UniProt: Q2K340 (all domains)
Gene: pyc

Molecule: PYRUVATE CARBOXYLASE

3D Structure

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Related Domains

Browse other domains in HMGL-like →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyHMGL-like(2002.1.1.25)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
Zinc ionZN
metal

+ 2 additives (Glycerin, Oxalate ion)

Glycerin

Pfam Families

PF00682HMGL-like

HMGL-like

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4MFD RCSB PDB: 4MFD PDBe: 4MFD UniProt: Q2K340

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Oxalate ionOXL

Shown in the structure viewer. Drug annotations from DrugDomain.