ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2f59A1 - ECOD Domain | ECOD

ECOD/Domains/e2f59A1

e2f59A1

UID: 000162666

PDB

Range: A:12-157
PDB: 2F59 chain A(all domains)
UniProt: Q57DY1 (all domains)
Gene: ribH1

Molecule: 6,7-dimethyl-8-ribityllumazine synthase 1

3D Structure

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Related Domains

Browse other domains in DMRL_synthase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupLumazine synthase(2007.1.13)

FFamilyDMRL_synthase(2007.1.13.1)

Ligands

in contact, ≤ 4 Å

5-Nitro-6-ribityl-amino-2,4(1H,3H)-pyrimidinedioneINI
drugDrugBank DB04162
Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00885DMRL_synthase

6,7-dimethyl-8-ribityllumazine synthase

External Links

ECOD PDB View: 2F59 RCSB PDB: 2F59 PDBe: 2F59 UniProt: Q57DY1

Downloads

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