ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3k3nA1 - ECOD Domain | ECOD

ECOD/Domains/e3k3nA1

e3k3nA1

UID: 001630197

PDB

Range: A:92-337
PDB: 3K3N chain A(all domains)
UniProt: Q9UPP1 (all domains)
Gene: PHF8

Molecule: PHD finger protein 8

3D Structure

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Related Domains

Browse other domains in JmjC, Cupin_8 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyJmjC, Cupin_8(10.12.1.101)

Ligands

in contact, ≤ 4 Å

FE (II) IONFE2
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

JmjC domain, hydroxylase

ClanCL0029Cupin

PF13621Cupin_8

Cupin-like domain

ClanCL0029Cupin

External Links

ECOD PDB View: 3K3N RCSB PDB: 3K3N PDBe: 3K3N UniProt: Q9UPP1

Downloads

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