ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2obdA1 - ECOD Domain | ECOD

ECOD/Domains/e2obdA1

e2obdA1

UID: 000163194

PDB

Range: A:5-225
PDB: 2OBD chain A(all domains)
UniProt: P11597 (all domains)
Gene: CETP

Molecule: Cholesteryl ester transfer protein

3D Structure

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Related Domains

Browse other domains in LBP_BPI_CETP →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupAha1/BPI domain-like(883)

HH-groupAha1/BPI domain-like(883.1)

TT-groupAha1/BPI domain-like(883.1.1)

FFamilyLBP_BPI_CETP(883.1.1.1)

Ligands

in contact, ≤ 4 Å

(Z,Z)-4-Hydroxy-N,N,N-Trimethyl-10-Oxo-7-[(1-Oxo-9-Octadecenyl)Oxy]-3,5,9-Trioxa-4-Phosphaheptacos-18-En-1-Aminium-4-OxidePCW
drugDrugBank DB03690
Cholesteryl oleate2OB
Chloride ionCL

Pfam Families

PF01273LBP_BPI_CETP

LBP / BPI / CETP family, N-terminal domain

ClanCL0648Aha1_BPI

External Links

ECOD PDB View: 2OBD RCSB PDB: 2OBD PDBe: 2OBD UniProt: P11597

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 3 additives (HEPES, Pentaethylene glycol, Tetraethylene glycol)

HEPESEPE
DrugBank DB16872
Pentaethylene glycol1PE
Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.