ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2olwA1 - ECOD Domain | ECOD

ECOD/Domains/e2olwA1

e2olwA1

UID: 000163670

PDB

Range: A:37-216
PDB: 2OLW chain A(all domains)
UniProt: P75966 (all domains)
Gene: rluE

Molecule: Ribosomal large subunit pseudouridine synthase E

3D Structure

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Related Domains

Browse other domains in PseudoU_synth_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupPseudouridine synthase(304.102)

TT-groupPseudouridine synthase(304.102.1)

FFamilyPseudoU_synth_2(304.102.1.1)

Ligands

in contact, ≤ 4 Å

1,4-DithiothreitolDTT
drugDrugBank DB04447

+ 2 additives (Acetic acid, Sulfate ion)

Acetic acidACY
DrugBank DB03166

Pfam Families

PF00849PseudoU_synth_2

RNA pseudouridylate synthase

ClanCL0649PseudoU_synth

External Links

ECOD PDB View: 2OLW RCSB PDB: 2OLW PDBe: 2OLW UniProt: P75966

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.