ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3kvaA2 - ECOD Domain | ECOD

ECOD/Domains/e3kvaA2

e3kvaA2

UID: 001636719

PDB

Range: A:373-479
PDB: 3KVA chain A(all domains)
UniProt: Q6ZMT4 (all domains)
Gene: KDM7A

Molecule: JmjC domain-containing histone demethylation protein 1D

3D Structure

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Related Domains

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Classification

AArchitecturealpha bundles(a.7)

XX-groupC-terminal helical domain in Jumonji domain-containing histone demethylases(6171)

HH-groupC-terminal helical domain in Jumonji domain-containing histone demethylases(6171.1)

TT-groupC-terminal helical domain in Jumonji domain-containing histone demethylases(6171.1.1)

FFamilyJHD(6171.1.1.1)

Ligands

in contact, ≤ 4 Å

OxygenOXY
drugDrugBank DB09140within 5 Å only
FE (II) IONFE2
metalwithin 5 Å only

Shown in the structure viewer.

Pfam Families

Jumonji helical domain

External Links

ECOD PDB View: 3KVA RCSB PDB: 3KVA PDBe: 3KVA UniProt: Q6ZMT4

Downloads

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Drug annotations from DrugDomain.