ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4qclA2 - ECOD Domain | ECOD

ECOD/Domains/e4qclA2

e4qclA2

UID: 001646146

PDB

Range: A:834-908,A:965-1078
PDB: 4QCL chain A(all domains)
UniProt: P09884 (all domains)
Gene: POLA1

Molecule: DNA polymerase alpha catalytic subunit

3D Structure

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Related Domains

Browse other domains in DNA_pol_B →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyDNA_pol_B(304.48.1.3)

Ligands

in contact, ≤ 4 Å

2'-Deoxycytidine 5'-triphosphateDCP
drugDrugBank DB03258
Magnesium ionMG
metal
Zinc ion

Pfam Families

PF00136DNA_pol_B

DNA polymerase family B

ClanCL0194DNA_pol_B-like

External Links

ECOD PDB View: 4QCL RCSB PDB: 4QCL PDBe: 4QCL UniProt: P09884

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.