ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2i50A1 - ECOD Domain | ECOD

ECOD/Domains/e2i50A1

e2i50A1

UID: 000165142

PDB

Range: A:5-126
PDB: 2I50 chain A(all domains)
UniProt: Q9Y5T5 (all domains)
Gene: USP16

Molecule: Ubiquitin carboxyl-terminal hydrolase 16

3D Structure

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Related Domains

Browse other domains in zf-UBP →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyzf-UBP(376.1.1.5)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Zn-finger in ubiquitin-hydrolases and other protein

ClanCL0229RING

External Links

ECOD PDB View: 2I50 RCSB PDB: 2I50 PDBe: 2I50 UniProt: Q9Y5T5

Downloads

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