ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2v62A1 - ECOD Domain | ECOD

ECOD/Domains/e2v62A1

e2v62A1

UID: 000165261

PDB

Range: A:15-330
PDB: 2V62 chain A(all domains)
UniProt: Q86Y07 (all domains)
Gene: VRK2

Molecule: SERINE/THREONINE-PROTEIN KINASE VRK2

3D Structure

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Related Domains

Browse other domains in Pkinase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyPkinase(206.1.1.1)

Ligands

in contact, ≤ 4 Å

Succinic acidSIN
drugDrugBank DB00139
Magnesium ionMG
metal

+ 1 additive (1,2-ETHANEDIOL)

Pfam Families

PF00069Pkinase

Protein kinase domain

ClanCL0016PKinase

External Links

ECOD PDB View: 2V62 RCSB PDB: 2V62 PDBe: 2V62 UniProt: Q86Y07

Downloads

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1,2-ETHANEDIOL

Shown in the structure viewer. Drug annotations from DrugDomain.