ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e2egvA1 - ECOD Domain | ECOD

ECOD/Domains/e2egvA1

e2egvA1

UID: 000165388

PDB

Range: A:66-229
PDB: 2EGV chain A(all domains)
UniProt: O66552 (all domains)
Gene: rsmE

Molecule: UPF0088 protein aq_165

3D Structure

Loading viewer...

Related Domains

Browse other domains in Methyltrans_RNA →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta knot(2488)

HH-groupalpha/beta knot(2488.1)

TT-groupalpha/beta knot(2488.1.1)

FFamilyMethyltrans_RNA(2488.1.1.12)

Ligands

in contact, ≤ 4 Å

AdemetionineSAM
drugDrugBank DB00118

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF04452Methyltrans_RNA

RNA methyltransferase domain

ClanCL0098SPOUT

External Links

ECOD PDB View: 2EGV RCSB PDB: 2EGV PDBe: 2EGV UniProt: O66552

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure