ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2qw5A1 - ECOD Domain | ECOD

ECOD/Domains/e2qw5A1

e2qw5A1

UID: 000165405

PDB

Range: A:6-332
PDB: 2QW5 chain A(all domains)
UniProt: Q3M5E3 (all domains)
Gene: Ava_4194

Molecule: Xylose isomerase-like TIM barrel

3D Structure

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Related Domains

Browse other domains in AP_endonuc_2 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAP_endonuc_2(2002.1.1.60)

Ligands

in contact, ≤ 4 Å

XyloseXLS
drugDrugBank DB09419
Chloride ionCL
Zinc ionZN

Pfam Families

PF01261AP_endonuc_2

Xylose isomerase-like TIM barrel

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 2QW5 RCSB PDB: 2QW5 PDBe: 2QW5 UniProt: Q3M5E3

Downloads

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metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.