ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3puqC3 - ECOD Domain | ECOD

ECOD/Domains/e3puqC3

e3puqC3

UID: 001654320

PDB

Range: C:586-706
PDB: 3PUQ chain C(all domains)
UniProt: Q9GYI0 (all domains)
Gene: jmjd-1.2

Molecule: Lysine-specific demethylase 7 homolog

3D Structure

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Related Domains

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Classification

AArchitecturealpha bundles(a.7)

XX-groupC-terminal helical domain in Jumonji domain-containing histone demethylases(6171)

HH-groupC-terminal helical domain in Jumonji domain-containing histone demethylases(6171.1)

TT-groupC-terminal helical domain in Jumonji domain-containing histone demethylases(6171.1.1)

FFamilyJHD(6171.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Jumonji helical domain

External Links

ECOD PDB View: 3PUQ RCSB PDB: 3PUQ PDBe: 3PUQ UniProt: Q9GYI0

Downloads

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