ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3puqA1 - ECOD Domain | ECOD

ECOD/Domains/e3puqA1

e3puqA1

UID: 001654321

PDB

Range: A:288-585
PDB: 3PUQ chain A(all domains)
UniProt: Q9GYI0 (all domains)
Gene: jmjd-1.2

Molecule: Lysine-specific demethylase 7 homolog

3D Structure

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Related Domains

Browse other domains in JmjC →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyJmjC(10.12.1.9)

Ligands

in contact, ≤ 4 Å

Oxogluric acidAKG
drugDrugBank DB08845
FE (II) IONFE2
metal

+ 1 additive (Glycerin)

Pfam Families

JmjC domain, hydroxylase

ClanCL0029Cupin

External Links

ECOD PDB View: 3PUQ RCSB PDB: 3PUQ PDBe: 3PUQ UniProt: Q9GYI0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Glycerin

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.