ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2pcnA1 - ECOD Domain | ECOD

ECOD/Domains/e2pcnA1

e2pcnA1

UID: 000165744

PDB

Range: A:3-163
PDB: 2PCN chain A(all domains)
UniProt: Q5KYY8 (all domains)
Gene: GK1813

Molecule: S-adenosylmethionine:2-demethylmenaquinone methyltransferase

3D Structure

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Related Domains

Browse other domains in RraA-like →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThe "swivelling" beta/beta/alpha domains(2487)

HH-groupThe "swivelling" beta/beta/alpha domain(2487.1)

TT-groupThe "swivelling" beta/beta/alpha domain(2487.1.1)

FFamilyRraA-like(2487.1.1.8)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03737RraA-like

Aldolase/RraA

ClanCL0364Leu-IlvD

External Links

ECOD PDB View: 2PCN RCSB PDB: 2PCN PDBe: 2PCN UniProt: Q5KYY8

Downloads

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