ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2yu4A1 - ECOD Domain | ECOD

ECOD/Domains/e2yu4A1

e2yu4A1

UID: 000165938

RepresentativePDB

Range: A:1-94
PDB: 2YU4 chain A(all domains)
UniProt: Q96MF7 (all domains)
Gene: NSMCE2

Molecule: E3 SUMO-protein ligase NSE2

3D Structure

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Related Domains

Browse other domains in zf-Nse →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyzf-Nse(376.1.1.15)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Zinc-finger of the MIZ type in Nse subunit

ClanCL0229RING

External Links

ECOD PDB View: 2YU4 RCSB PDB: 2YU4 PDBe: 2YU4 UniProt: Q96MF7

Downloads

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