ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3zgvA2 - ECOD Domain | ECOD

ECOD/Domains/e3zgvA2

e3zgvA2

UID: 001660307

PDB

Range: A:57-188,A:233-355
PDB: 3ZGV chain A(all domains)
UniProt: Q8IXJ6 (all domains)
Gene: SIRT2

Molecule: NAD-DEPENDENT PROTEIN DEACETYLASE SIRTUIN-2

3D Structure

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Related Domains

Browse other domains in SIR2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupDHS-like NAD/FAD-binding domain(2003.1.4)

FFamilySIR2(2003.1.4.5)

Ligands

in contact, ≤ 4 Å

Adenosine-5-DiphosphoriboseAR6
drugDrugBank DB02059

+ 3 additives (Acetate, Glycerin, Triethylene glycol)

AcetateACT
DrugBank DB14511

Pfam Families

Sir2 family

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3ZGV RCSB PDB: 3ZGV PDBe: 3ZGV UniProt: Q8IXJ6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL

DrugBank DB09462

Triethylene glycolPGE

DrugBank DB02327

Shown in the structure viewer. Drug annotations from DrugDomain.