ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4gbdB1 - ECOD Domain | ECOD

ECOD/Domains/e4gbdB1

e4gbdB1

UID: 001661519

PDB

Range: B:67-364
PDB: 4GBD chain B(all domains)
UniProt: Q9HZ64 (all domains)
Gene: PA3170

Molecule: Putative uncharacterized protein

3D Structure

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Related Domains

Browse other domains in Amidohydro_1 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAmidohydro_1(2002.1.1.83)

Ligands

in contact, ≤ 4 Å

(8R)-3-(5-S-methyl-5-thio-beta-D-ribofuranosyl)-3,6,7,8-tetrahydroimidazo[4,5-d][1,3]diazepin-8-olMCF
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01979Amidohydro_1

Amidohydrolase family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4GBD RCSB PDB: 4GBD PDBe: 4GBD UniProt: Q9HZ64

Downloads

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