ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1yjdC1 - ECOD Domain | ECOD

ECOD/Domains/e1yjdC1

e1yjdC1

UID: 000001668

RepresentativePDB

Range: C:1-118
PDB: 1YJD chain C(all domains)
UniProt: P10747 (all domains)
Gene: CD28

Molecule: T-cell-specific surface glycoprotein CD28

3D Structure

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Related Domains

Browse other domains in V-set_2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyV-set_2(11.1.1.192)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF15910V-set_2

ICOS V-set domain

ClanCL0159E-set

External Links

ECOD PDB View: 1YJD RCSB PDB: 1YJD PDBe: 1YJD UniProt: P10747

Downloads

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