ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3mr5A1 - ECOD Domain | ECOD

ECOD/Domains/e3mr5A1

e3mr5A1

UID: 001668069

PDB

Range: A:0-27,A:88-242
PDB: 3MR5 chain A(all domains)
UniProt: Q9Y253 (all domains)
Gene: POLH

Molecule: DNA polymerase eta

3D Structure

Loading viewer...

Related Domains

Browse other domains in IMS →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyIMS(304.48.1.10)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosineXG4

+ 1 additive (Glycerin)

GlycerinGOL

Pfam Families

impB/mucB/samB family

External Links

ECOD PDB View: 3MR5 RCSB PDB: 3MR5 PDBe: 3MR5 UniProt: Q9Y253

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.