ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3nneB1 - ECOD Domain | ECOD

ECOD/Domains/e3nneB1

e3nneB1

UID: 001671727

PDB

Range: B:1-305,B:471-530
PDB: 3NNE chain B(all domains)
UniProt: Q7X2H8 (all domains)
Gene: codA

Molecule: Choline oxidase

3D Structure

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Related Domains

Browse other domains in GMC_oxred_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyGMC_oxred_N(2003.1.2.2)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer.

Pfam Families

PF00732GMC_oxred_N

GMC oxidoreductase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3NNE RCSB PDB: 3NNE PDBe: 3NNE UniProt: Q7X2H8

Downloads

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Drug annotations from DrugDomain.