ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4u4bA1 - ECOD Domain | ECOD

ECOD/Domains/e4u4bA1

e4u4bA1

UID: 001674027

PDB

Range: A:112-347
PDB: 4U4B chain A(all domains)
UniProt: Q47465 (all domains)
Gene: pel-3

Molecule: Pectate lyase

3D Structure

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Related Domains

Browse other domains in Pectate_lyase →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupPectin lyase-like(207.2)

TT-groupPectin lyase-like(207.2.1)

FFamilyPectate_lyase(207.2.1.9)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03211Pectate_lyase

Pectate lyase

ClanCL0268Pec_lyase-like

External Links

ECOD PDB View: 4U4B RCSB PDB: 4U4B PDBe: 4U4B UniProt: Q47465

Downloads

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