ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4zhhB1 - ECOD Domain | ECOD

ECOD/Domains/e4zhhB1

e4zhhB1

UID: 001674552

PDB

Range: B:3-177
PDB: 4ZHH chain B(all domains)
UniProt: P80188 (all domains)
Gene: LCN2

Molecule: Neutrophil gelatinase-associated lipocalin

3D Structure

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Related Domains

Browse other domains in Lipocalin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupLipocalins/Streptavidin(9)

HH-groupLipocalins(9.1)

TT-groupLipocalins(9.1.1)

FFamilyLipocalin(9.1.1.1)

Ligands

in contact, ≤ 4 Å

N,N'-butane-1,4-diylbis[1-hydroxy-N-(3-{[(1-hydroxy-6-oxo-1,6-dihydropyridin-2-yl)carbonyl]amino}propyl)-6-oxo-1,6-dihydropyridine-2-carboxamide]4OL
Chloride ionCL
SAMARIUM (III) IONSM

Pfam Families

PF00061Lipocalin

Lipocalin / cytosolic fatty-acid binding protein family

ClanCL0116Calycin

External Links

ECOD PDB View: 4ZHH RCSB PDB: 4ZHH PDBe: 4ZHH UniProt: P80188

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metalwithin 5 Å only

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.