ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5buvA1 - ECOD Domain | ECOD

ECOD/Domains/e5buvA1

e5buvA1

UID: 001674686

PDB

Range: A:2-173
PDB: 5BUV chain A(all domains)
UniProt: A1JNA0 (all domains)
Gene: wbcA

Molecule: Putative epimerase

3D Structure

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Related Domains

Browse other domains in dTDP_sugar_isom →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilydTDP_sugar_isom(10.12.1.4)

Ligands

in contact, ≤ 4 Å

6-AMINOPYRIMIDIN-2(1H)-ONECYT

+ 2 additives (Phosphate ion, 1,2-ETHANEDIOL)

Phosphate ionPO4
DrugBank DB14523
1,2-ETHANEDIOLEDO

Pfam Families

PF00908dTDP_sugar_isom

dTDP-4-dehydrorhamnose 3,5-epimerase

ClanCL0029Cupin

External Links

ECOD PDB View: 5BUV RCSB PDB: 5BUV PDBe: 5BUV UniProt: A1JNA0

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.