ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3cmgA1 - ECOD Domain | ECOD

ECOD/Domains/e3cmgA1

e3cmgA1

UID: 000167797

PDB

Range: A:301-606
PDB: 3CMG chain A(all domains)
UniProt: Q5LIC7 (all domains)
Gene: lacZ_4

Molecule: Putative beta-galactosidase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_2_C →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_2_C(2002.1.1.104)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 2 additives (Phosphate ion, (4S)-2-METHYL-2,4-PENTANEDIOL)

Phosphate ionPO4
DrugBank DB14523
(4S)-2-METHYL-2,4-PENTANEDIOLMPD

Shown in the structure viewer.

Pfam Families

PF02836Glyco_hydro_2_C

Glycosyl hydrolases family 2, TIM barrel domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 3CMG RCSB PDB: 3CMG PDBe: 3CMG UniProt: Q5LIC7

Downloads

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Drug annotations from DrugDomain.