ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4uj3M1 - ECOD Domain | ECOD

ECOD/Domains/e4uj3M1

e4uj3M1

UID: 001678217

PDB

Range: M:6-181
PDB: 4UJ3 chain M(all domains)
UniProt: P62491 (all domains)
Gene: RAB11A

Molecule: RAS-RELATED PROTEIN RAB-11A

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ras →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyRas(2004.1.1.19)

Ligands

in contact, ≤ 4 Å

Phosphoaminophosphonic acid guanylate esterGNP
drugDrugBank DB02082
Magnesium ionMG
metal

+ 1 additive (Sulfate ion)

Pfam Families

Ras family

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 4UJ3 RCSB PDB: 4UJ3 PDBe: 4UJ3 UniProt: P62491

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.