ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5c83A1 - ECOD Domain | ECOD

ECOD/Domains/e5c83A1

e5c83A1

UID: 001678588

PDB

Range: A:248-354
PDB: 5C83 chain A(all domains)
UniProt: P98170 (all domains)
Gene: XIAP

Molecule: E3 ubiquitin-protein ligase XIAP

3D Structure

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Related Domains

Browse other domains in BIR →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupInhibitor of apoptosis (IAP) repeat(381)

HH-groupInhibitor of apoptosis (IAP) repeat(381.1)

TT-groupInhibitor of apoptosis (IAP) repeat(381.1.1)

FFamilyBIR(381.1.1.1)

Ligands

in contact, ≤ 4 Å

(2R,5R)-4-[2-(6-benzyl-3,3-dimethyl-2,3-dihydro-1H-pyrrolo[3,2-c]pyridin-1-yl)-2-oxoethyl]-5-(methoxymethyl)-2-methylpiperazin-1-ium4YN
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Inhibitor of Apoptosis domain

ClanCL0417BIR-like

External Links

ECOD PDB View: 5C83 RCSB PDB: 5C83 PDBe: 5C83 UniProt: P98170

Downloads

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