ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2vd8A1 - ECOD Domain | ECOD

ECOD/Domains/e2vd8A1

e2vd8A1

UID: 000167950

PDB

Range: A:3-12,A:249-389
PDB: 2VD8 chain A(all domains)
UniProt: Q81VF6 (all domains)

Molecule: ALANINE RACEMASE

3D Structure

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Related Domains

Browse other domains in Ala_racemase_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupAlanine racemase-C(1.1.7)

FFamilyAla_racemase_C(1.1.7.6)

Ligands

in contact, ≤ 4 Å

Pyridoxal phosphatePLP
drugDrugBank DB00114within 5 Å only
Magnesium ionMG
metalwithin 5 Å only

Shown in the structure viewer.

Pfam Families

PF00842Ala_racemase_C

Alanine racemase, C-terminal domain

ClanCL0866ALR_C-like

External Links

ECOD PDB View: 2VD8 RCSB PDB: 2VD8 PDBe: 2VD8 UniProt: Q81VF6

Downloads

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Drug annotations from DrugDomain.