ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2vd8A2 - ECOD Domain | ECOD

ECOD/Domains/e2vd8A2

e2vd8A2

UID: 000167951

PDB

Range: A:13-248
PDB: 2VD8 chain A(all domains)
UniProt: Q81VF6 (all domains)

Molecule: ALANINE RACEMASE

3D Structure

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Related Domains

Browse other domains in Ala_racemase_N →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAla_racemase_N(2002.1.1.53)

Ligands

in contact, ≤ 4 Å

Pyridoxal phosphatePLP
drugDrugBank DB00114within 5 Å only
Chloride ionCL
Magnesium ionMG

Pfam Families

PF01168Ala_racemase_N

Alanine racemase, N-terminal domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 2VD8 RCSB PDB: 2VD8 PDBe: 2VD8 UniProt: Q81VF6

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.