ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4qicA2 - ECOD Domain | ECOD

ECOD/Domains/e4qicA2

e4qicA2

UID: 001679631

PDB

Range: A:2-90
PDB: 4QIC chain A(all domains)
UniProt: A0A0M3KKV8 (all domains)
Gene: BQ10980

Molecule: Sensory transduction regulatory protein, Anti-anti-sigma factor PhyR

3D Structure

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Related Domains

Browse other domains in PhyR_sigma2 →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupSigma2 domain-like(142)

HH-groupSigma2 domain of RNA polymerase sigma factors(142.1)

TT-groupSigma2 domain of RNA polymerase sigma factors(142.1.1)

FFamilyPhyR_sigma2(142.1.1.8)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF22029PhyR_sigma2

Sigma2 domain of PhyR

ClanCL0123HTH

External Links

ECOD PDB View: 4QIC RCSB PDB: 4QIC PDBe: 4QIC UniProt: A0A0M3KKV8

Downloads

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