ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4v36A1 - ECOD Domain | ECOD

ECOD/Domains/e4v36A1

e4v36A1

UID: 001680172

PDB

Range: A:644-850
PDB: 4V36 chain A(all domains)
UniProt: Q65MA9 (all domains)
Gene: yfiX

Molecule: LYSYL-TRNA-DEPENDENT L-YSYL-PHOSPHATIDYLGYCEROL SYNTHASE

3D Structure

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Related Domains

Browse other domains in LPG_synthase_C →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNat/Ivy(213)

HH-groupAcyl-CoA N-acyltransferases (Nat)(213.1)

TT-groupAcyl-CoA N-acyltransferases (Nat)(213.1.1)

FFamilyLPG_synthase_C(213.1.1.21)

Ligands

in contact, ≤ 4 Å

2,6-Diamino-Hexanoic Acid AmideLYN
drugDrugBank DB03988

+ 1 additive (Tromethamine)

TromethamineTRS
DrugBank DB03754

Pfam Families

PF09924LPG_synthase_C

Phosphatidylglycerol lysyltransferase, C-terminal

ClanCL0257Acetyltrans

External Links

ECOD PDB View: 4V36 RCSB PDB: 4V36 PDBe: 4V36 UniProt: Q65MA9

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.